شناسایی فیلوژنتیکی باکتری‌های اندوفیت جداشده از ریشه بادمجان و بررسی توان آنتاگونیستی آن‌ها

 Abo-Aba, S.E.M., Solinum, E.A.M., Nivien, A.A. (2006) Enhanced production of extra cellular alkaline protease in Bacillus circulance through plasmid transfer. Research Journal of Agriculture and Biological Sciences, 2: 526-530.

Alstrom, S., Burns, R.G. (1989) Cyanide production by rhizobacteria as a possible mechanism of plant growth inhibition. Biology and Fertility of Soils, 7: 232- 238.

Altschul, S.F., Gish, W., Miller, W., Mayers, E.W., Lipman, D.J. (1990) Basic local alignment search tool. Journal of Molecular Biology, 5: 215: 403-410.

Amaresan, N., Jayakumar, V., Thajuddin, N. (2012)  Isolation and characterization of endophytic bacteria associated with chilli (Capsicum annuum) grown in coastal agricultural ecosystem. Indian Journal of Biotechnology, 13: 247-255.

Bagnasco, P., De la fuente, L., Gualtieri, G., Noya, F., Arias, A. (1998) Fluorescent Pseudomonas spp. As biocontrol agent against forage legume root pathogenic fungi. Soil Biology and Biochemistry, 30: 1317-1322.

Bakker, P.A.H.M., Ran, L.X., Pieterse, C.M.J., Van loon, L.C. (2003) Understanding the involvement of rhizobacteria-mediated induction of systemic resistance in biocontrol of plant disease.Canadian Journal of Plant Pathology, 25: 5-9.

Bashan, Y. and Holguin, G. )1998( Proposal for the division of plant growth promoting rhizobacteria in to two classifications: biocontrol-PGPB (plant growth-promoting bacteria) and PGPB. Soil Biology Biocheimistry, 30: 1225-1228.

Hall, T.A. (1999) Bioedit: a user-friendly biological sequence alignment editor and analysis program for windows 95/98 NT. Nucleic acid symposium series, 41: 95-98.

Hallmann, J., Quadt-Hallmann, A., Mahaffee, W.F.,  Kloepper, J.W. (1997) Bacterial endophytes in agricultural crops. Canadian Journal of Microbiology, 43: 895-914.

Izumi, H. )2011( Diversity of Endophytic Bacteria in Forest Trees. Pp. 95-105. In: Pirttilä A.M. and Frank A.C (eds). Endophytes of Forest Trees. Springer Netherlands.

Jasim, B., Joseph, A.A., John, C.J., Mathew, J., Radhakrishnan, E.K. (2014) Isolation and characterization of plant growth promoting endophytic bacteria from the rhizome of Zingiber officinale. Biotechnology, 4: 197-204.

Kimura, M. (1980) A simple method for estimating evolutionary rates of base subsituation through comparative studies of nucleotide sequence. Molecular Evolution, 16: 111-120.

Kobayashi, D.Y., Palumbo, J.D. (2000) Bacterial endophytes and their effects on plants and uses in agriculture. Pp. 199-233. In: Bacon CW and White JF (eds). Microbial endophytes. Marcel Dekker, New York.

Kumar, P., Dubey, R.C., Maheshwari, D.k. (2012) Bacillus strains isolated from rhizosphere showed plant growth promoting and antagonistic activity against phytopathogens. Microbiological Research, 167: 493-499.

Lugtenberg, B., Kamilova, F. (2009) Plant-growth-promoting rhizobacteria. Annual Review of Microbiology, 63: 541–556.

Luna, C.L., Mariano,. R.L.R., Souto-Maior, A.M. (2002) Production of a Biocontrol agent for Crucifers Black Rot Disease. Brazilian Journal of Chemical Engineering, 19: 133-140.

Mantelin, S., Touraine, B. (2004) Plant growth-promoting bacteria and nitrate availability: impacts on root development and nitrate uptake. Journal of Experimental Botany, 55: 27-34.

Maurhofer, M., Keel, C., Haas, D., Defago, G. (1995) Influence of plant species disease suppression by Pseudomona fluorescens strain CHAO with enhanced antibiotic production. Plant Pathology, 44: 40- 50.

Nagarajkumar, M., Bhaskaran, R., Velazhahan, R. (2004) Involvement of secondry metaboloties and extracellular lytic enzymes produced dy Pseudomonas fluorescens in inhibition of Rhizoctonia solani, the rice, sheath blight pathogen. Microbiological Research, 159: 73-81.

Page, R.D.M. (1996) Tree view: an application to display phylogenetic trees on personal computers. Cabios Application Note, 12: 357-358.

Rasolisedghiyani, M., Rahimiyan, P., Khavari, K., Malakoti, M.H. (2005) Study of population density and identification of wheat phizospheric fluorescent pseudomonas in different region in Iran. Journal of Water and Soil Science, 19: 224-234.

Sambrook, J., Russell, D.W. (2001) Molecular Cloning, a Laboratory Manual.  Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY. 1863P.

Schulz, B., Boyle, C (2006) What are endophytes? Pp 1–13 In Schulz B, Boyle C and Sieber T.N (eds). Microbial Root Endophytes Springer-Verlag, Berlin

Schywan, B., Neilands, J.B. (1987) Universal chemical assay for detection and determination of sidrophores. AnalyticalBiochemistry, 160: 47-56.

Stepniewska, Z., Kuzniar, A. (2013) Endophytic microorganisms- promising applications in bioremediation of greenhouse gases. Applied Microbiology and Biotechnology, 97: 9589-9596.

Strobel, G., Daisy, B. (2003) Bioprospecting for microbial endophytes and their natural products. Microbiology and Molecular Biology Reviews, 67: 491-502.

Swofford, D.L. (2002) Phylogenetic analysis using parsimony (and other methods). Sunderland, Massachsetts Sinauer Associates.

Szilagyi-Zecchin, V.J., Ikeda, A.C., Hungria, M., Adamoski, D., Kava-Cordeiro, V., Glienke, C., Galli-Terasawa, L.V.G. (2014) Identification and characterization of endophytic bacteria from corn (Zea mays L.) roots with biotechnological potential in agriculture. AMB Express, 4: 2-9.

Thompson, J.D., Gibson, T.J. Plewniak, F., Jeanmougin, F., Higgins, D.G. (1997) The clustal-x windows interface: flexible strategis for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research, 15: 4876-4882.

Weisburg, W.G., Barns, S.M., Pelletier, D.A., Lane, D.J. (1991) 16S ribosomal DNA amplification for phylogenetic study. Journal of Bacteriology, 173: 697- 703.

Yaish, M.W., Antony, I. and Glick, B.R. (2015) Isolation and characterization of endophytic plant growth-promoting bacteria from date palm tree (Phoenix dactylifera L.) and their potential role in salinity tolerance. Antonie Van Leeuwenhoek, 107: 1519-1532.